Hey Gherkinhead...
I have noticed the same exact thing, both on 3 pars, Wolf Creek and Pebble...I believe the topography must be built into the WGT Algorythms...it seems on Wolf Creek hitting down onto the par 3 surround by cliffs, the wind has a "canyon effect"...wind getting trapped in the canyon and pushed around by wind blowing over the canyon...the ball seems to always drift to the extreme right. On Pebble, the par 3 surrounded by the Pacific ocean has swirling winds that push the ball to the right as well and it easy to overshoot the green...this would be caused by the pacific winds.
What I do is make sure I have my flag animation set to on...this way, before hitting, I can check which way, and how strong, the flag is blowing on the green...try it, it may help.